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$3.9M project on self-deleting genes takes aim at mosquito-borne diseases

January 4, 2021 by Rob Williams

Texas A&M AgriLife researchers’ work to aid mosquito control efforts

by Olga Kuchment, Texas A&M AgriLife Marketing and Communications

mosquito close-upTo control mosquito populations and prevent them from transmitting diseases such as malaria, many researchers are pursuing strategies in mosquito genetic engineering. A new Texas A&M AgriLife Research project aims to enable temporary “test runs” of proposed genetic changes in mosquitoes, after which the changes remove themselves from the mosquitoes’ genetic code.

The project’s first results were published on Dec. 28 in Philosophical Transactions of the Royal Society B, titled “Making gene drive biodegradable.”

Zach Adelman, Ph.D, and Kevin Myles, Ph.D., both professors in the Texas A&M College of Agriculture and Life Sciences Department of Entomology are the principal investigators. Over five years, the team will receive $3.9 million in funding from the National Institute of Allergy and Infectious Diseases to test and fine-tune the self-deleting gene technology.

“People are wary of transgenes spreading in the environment in an uncontrolled manner. We feel that ours is a strategy to potentially prevent that from happening,” Adelman said. “The idea is, can we program a transgene to remove itself? Then, the gene won’t persist in the environment.

“What it really comes down to is, how do you test a gene drive in a real-world scenario?” he added. “What if a problem emerges? We think ours is one possible way to be able to do risk assessment and field testing.”

A crucial target for mosquito control

Many genetic engineering proposals revolve around inserting into mosquitoes a select set of new genes along with a “gene drive.” A gene drive is a genetic component that forces the new genes to spread in the population.

“A number of high-profile publications have talked about using a gene drive to control mosquitoes, either to change them so they can’t transmit malaria parasites anymore, or to kill off all the females so the population dies out,” Adelman said.

An often-voiced worry is that such genetic changes could carry unintended or harmful consequences.

One plan makes the cut

In the project’s first publication, the colleagues describe three ways for an introduced genetic change to remove itself after a designated period of time. The time period could, for instance, be 20 generations of mosquitoes, or about a year. The team modeled how the genes would spread among mosquitoes based on generation times and parameters of an average mosquito’s life. Of the three methods, the team has chosen one to pursue further.

This method takes advantage of a process all animals use to repair damaged DNA, Adelman said. Inside cell nuclei, repair enzymes search for repeated genetic sequences around broken DNA strands. The repair enzymes then delete what’s between the repeats, he said.

So, Adelman and Myles’ team plans to test in fruit flies and mosquitoes a gene drive, a DNA-cutting enzyme and a small repeat of the insect’s own DNA.

Once the introduced enzyme cuts the DNA, the insect’s own repair tools should jump into action. The repair tools will cut out the genes for the gene drive and the other added sequences. At least, that’s what should happen in theory.

Failure is not just an option, it’s part of the plan

The team has already started lab work to test different gene drives and determine how long they last in flies and mosquitoes. The goal is to see a gene drive spread rapidly through a lab insect population. After a few generations, the added genes should disappear and the population should again consist of wild-type individuals.

“We assigned various rates of failure for how often the mechanism does not work as expected,” Adelman said. “The models predict that even with a very high rate of failure, if it succeeds just 5% of the time, that’s still enough to get rid of the transgene.”

 

Congratulations Fall 2020 Graduates

December 18, 2020 by Rob Williams

The Department of Entomology congratulates our students graduating during the College of Agriculture and Life Sciences commencement ceremonies held at Reed Arena during the week of December 9-18.

A total of 21 students from the department are will receive their diplomas along with thousands of other students within the College of Agriculture and Life Sciences this fall. Seven of the Ph.D. students received their hoods during the doctoral hooding ceremony held on December 10 and degrees will be conferred to three M.S. and eleven B.S. students during the 2pm ceremony on the 18th.

“We could not be more proud of our undergraduate scholars completing their degrees in our FIVS and ENTO majors.  We know that they are headed into an exciting world and will bring their Aggie spirit and values with them as they add to our incredible alumni base,” said Dr. Phillip Kaufman, professor and head.  “We also offer our deepest congratulations to our M.S. and Ph.D. graduates.  These students demonstrated their resilience and excellence through sustained efforts to complete their research during this most challenging time.”

Kaufman added that student success was supported by hard work and dedication from everyone in the department.

“I also want to thank all of the students, staff, and faculty of the department who each contributed to these graduates’ experiences and success,” he said.

Undergraduates

Marisa Nicole Guerrero Entomology
Isaac Eduardo Luna Entomology
Lyann W Chen Forensic & Investigative Sciences – Science Emphasis
Annie Mei Lin Lin Forensic and Investigative Sciences – Law Emphasis
Samuel Scriven Forensic and Investigative Sciences – Law Emphasis
Cameron R Kelly Wildlife and Fisheries Sciences and Entomology
Andrea Reyna Macias Psychology and Entomology
Danielle Celeste Merrell Horticulture and Entomology
Ashley M Ridlon Biomedical Sciences and Entomology
Christine Victoria Torres Wildlife and Fisheries Sciences and Entomology
Leah Danielle Voss Biomedical Sciences and Entomology/Psychology double degree

 

Graduates – Master of Science

Dayvion Reshaud Adams Entomology
Lauren Kate Crumley Entomology
Kyle Andrew Gilder Entomology

 

Graduates – Ph.D.

Bert Foquet Entomology
Cody Gale Entomology
Mark Allan Janowiecki Entomology
Mackenzie Kjeldgaard Entomology
Ashley Elizabeth Tessnow Entomology
Erfan Vafaie Entomology
Caixing Xiong Entomology

 

Students Win Top Awards at ESA Annual Meeting

December 1, 2020 by Rob Williams

Casey Flint
Casey Flint
Mackenzie Kjeldgaard
Mackenzie Kjeldgaard
Jordan Ellis
Jordan Ellis
Crystal Wright
Crystal Wright
Erfan Vafaie
Erfan Vafaie
Jaclyn Martin
Jaclyn Martin
Ashley Tessnow
Jordan Gomez

Eight students from the Texas A&M Department of Entomology were awarded 1st or 2nd place in the 2020 Entomological Society of America’s annual national meeting student 10-minute paper competition for the Presidents Prize.

This year’s meeting was held virtually from November 11-25. During the competition, students presented their research in one of four sections: 1. Medical, Urban, Veterinary Entomology, 2. Physiology, Biochemistry, and Toxicology, 3. Plant – Insect Ecology(P-IE), and 4. Systematics, Evolution and Biodiversity (SysEB).

“We are quite proud of all of our TAMU students who participated in the 2020 ESA meeting, including those presenting talks and posters, as well as those participating in the Entomology Games and the Student Debate,” Professor and Department Head Dr. Phillip Kaufman said.

Kaufman said that the Department did quite well participating, despite the changes in the meeting delivery format due to the pandemic.

“This is made even more impressive by the unusual circumstances we find ourselves in; having on-line talks, debates and games was especially challenging and I applaud our students showcasing what it really means to exhibit Aggie Excellence. The success of our students at the meeting demonstrates the excellence in all of our student research, the quality of our students, and support from their faculty mentors and peers.”

The awards were given to the following:

Graduate Student 10-Minute Paper Competition

Medical, Urban, Veterinary Entomology:

  • Casey Flint: Second Place – Forensic Entomology, Muscoid Flies
    “Who runs the (decomposition) world? Microbes influencing decomposition and attraction of the blow fly, Cochliomyia macellaria”
  • Mackenzie Kjeldgaard: Second Place – Hymenoptera, Spiders
    “Polygyne ants are not cooperating: Colony boundaries and larval discrimination in multiple-queencolonies of the red imported fire ant (Solenopsis invicta)”

Physiology, Biochemistry, and Toxicology:

  • Jordan Ellis: Second Place – Pollinators 1
    “Honey bee (Apis mellifera) workers experience accelerated age polyethism and premature death due to developmental stressors”

Plant – Insect Ecology:

  • Crystal Wright: First Place – Biocontrol 1
    “Characterization of honeydew sugar profiles in sugarcane aphids on sorghum and Johnson grass”
  • Erfan Vafaie: First Place – Biocontrol 2
    “Whitefly suppression by multiple natural enemies challenges with whitefly immigration or delayed natural enemy releases”
  • Jaclyn Martin: First Place – Vectors of Plant Disease
    “Revealing differences in the viral transmission mechanism between viruliferous and nonviruliferous Tagosodes orizicolus using transmission electron microscopy”

Systematics, Evolution, & Biodiversity:

  • Ashley Tessnow: First Place – Genomics
    “Patterns of divergence between fall armyworm strains: New insights from genomic and behavioral studies”

Undergraduate Student 10-Minute Paper Competition

  • Jordan Gomez: First Place – Physiology, Biochemistry, and Toxicology – Pollinators
    “Determining the effects of nutrition on honey bee (Apis mellifera) pathogen defense against deformed wing virus”

 

 

Juliana Rangel Receives Award for Outstanding Research, Outreach in Beekeeping Industry

November 6, 2020 by Rob Williams

Juliana Rangel, left, with John Talbot, center, and Ashley Ralph. Photo by Rob Williams.
Juliana Rangel (left) with John Talbot (center), and Ashley Ralph, Texas Beekeepers Association president (right). Photo by Rob Williams.

The Department of Entomology at Texas A&M congratulates Dr. Juliana Rangel as she received the Dr. John G. Thomas Meritorious Service Award from the Texas Beekeepers Association during a special visit on Tuesday, November 3.

Rangel received the award for her outstanding research and her dedication to the beekeeping industry. Her research involves investigating various aspects of the reproductive biology of honey bee queens and drones, honey bee nutritional biology, and the behavioral ecology and genetics of managed and wild honey bees.

The award is given to a non-commercial beekeeper, researcher, regulator, industry or individual who has had a major impact on the Texas beekeeping industry.

Since joining the Department in 2013, Rangel has acquired over $1 million in extramural support and funding for her research program, focusing on providing solutions to improve colony health, such as a study on the effects of agricultural pesticides on honey bee fertility, a grant to identify floral sources foraged by honey bees in four locations in the U.S., and a grant to create and lead the Texas A&M University’s Tech Transfer Team.

In collaboration with the Texas Beekeeepers Association, Rangel also wrote a successful grant to raise awareness of the benefits of “Real Texas Honey.” Along with the above major grants, she has forged several significant collaborations with faculty and scientists at the national and international levels to research honey bee reproduction, ecological genetics of feral Africanized honey bees, and integrated pest management techniques for control of Varroa destructor mites in Texas apiaries.

Rangel appreciated the association and the Department for supporting her research programs.

“I am so grateful to the Texas Beekeeper Association and to the Department of Entomology for taking the time to do this and for allowing me to travel to other cities to talk about our research program,” Rangel said. “It is truly an honor and I am humbled and grateful for them to give me this award.”

TBA president Ashley Ralph said that Rangel’s research has provided a positive impact on the beekeeping industry and Texas agriculture as a whole.

“We are so proud to award Juliana the John G. Thomas Meritorious Service Award for her continued work in research and education,” Ralph said. “Through her research and the research of the graduate students she leads in the Honey Bee Research Program, we are given a better understanding of what we consider to be the most fascinating insect on the planet. Honey bees are the backbone of our diverse Texas agriculture and this research allows us all to be better stewards for bees.”

Aggie awarded grant for sugarcane aphid research

October 27, 2020 by Rob Williams

Student strides to make entomology, STEM more inclusive

by Susan Himes, Texas A&M AgriLife Marketing and Communications

Jocelyn Holt looking through grass for aphids.
Jocelyn Holt was awarded a USDA NIFA grant for her work on sugarcane aphids and their genetics. (Texas A&M AgriLife photo)

Jocelyn Holt, a doctorate candidate in the Department of Entomology of Texas A&M University’s College of Agriculture and Life Sciences, understands it is easier to win a battle when you know what weapons your enemies have in their arsenal.

Following that line of thinking, Holt envisions a future where agricultural producers will know key genetic traits of the pests on their crops so they may target them more precisely. But Holt wants to take that line of thinking a step further; she wants to make studies like this in the field of entomology more accessible for all.

Aiding agriculture

“I hope in the future that we’ll be able to genetically screen an insect population to see if it will benefit from biocontrol or determine if whether using a biopesticide is a more effective approach,” said Holt.

Holt’s academic focus is the interplay between population genetics, microbial composition and beneficial interactions, or mutualisms, in invasive insect species. Her innovative thinking and approach to looking at pest-related agricultural problems has already garnered her many awards, grants and recognition.

“Ultimately with my work I want to broaden our understanding of genetics and microbiota and how we can use that info to be more successful at agriculture,” Holt stated. “When it comes to pest control, one-size-fits-all is not the most effective approach.”

Microbiota are defined as ecological communities of commensal, symbiotic and pathogenic microorganisms, which are found in and on all multicellular organisms, from plants to animals.

Holt said once a pest’s genetics and microbiota are better understood, it can influence the methods producers take to manage or control those pests.

“Jocelyn’s framing of invasive species as invasive communities, due to the microbiota they bring with them, provides a refreshing way to approach the study of invasive species and their interactions with the communities they encounter at the locations they invade,” said Raul Medina, Ph.D., Texas A&M Department of Entomology professor, Bryan-College Station.

Holt, who works in the Medina lab, counts him as a mentor and he in turn is one of her strongest supporters. Holt said she enjoys the process of interfacing with the Texas A&M AgriLife Extension Service specialists and collaborating with other scientists and researchers in academia and government institutions, such as the U.S. Department of Agriculture.

“Once we know the data, it is also important to me to make that content widely accessible in some form,” she said. “Not just having scientific papers published or having graphical abstracts. If something like an infographic poster makes the information more accessible to AgriLife Extension county agents and our stakeholders, then that is what we’ll need to do. I want to present content in multiple formats so it can reach the broadest audience that may benefit from it.”

NIFA grant to study sugarcane aphid

The USDA’s National Institute of Food and Agriculture, NIFA, recently awarded Holt a predoctoral fellowship grant for her work on Melanaphis sacchari, better known as the sugarcane aphid. Holt’s grant runs through 2023.

“If a producer can one day easily identify the genetics of the sugarcane aphid in their fields, they will know how to better fight them, and there will be less economic loss,” she said.

Holt said her previous research shows that there are genetic and microbial composition differences between sugarcane aphids on sorghum and sugarcane.

“However, it is still unknown whether variation among Buchnera aphidicola strains in sugarcane aphids positively influence this insect’s pestiferous nature,” she explained.

SCAs have been a problem for sorghum producers in Texas since 2013, after the introduction of a new sorghum-adapted lineage. They produce large amounts of honeydew, which can clog combines. In 2013, some sorghum growers lost up to 50% of their crop due to sugarcane aphid-infested fields.

Holt is examining the genetic differences among populations of sugarcane aphids and is especially interested in determining if their differing microbiota correspond to genetically distinct aphid populations, which in turn could affect what damage different populations may do to crops.

In the genes

Holt’s grant, “Assessing Ecological Facilitation by the Symbiont Buchnera Aphidicolain Genetically Distinct Sugarcane Aphid Populations,” could prove to be a key tool in future efforts to combat the aphids and other pests.

SCAs rely on the obligate symbiont Buchnera aphidicola, a type of bacteria living in a specialized organ inside of the sugarcane aphid, which creates essential nutrients that aphids need to survive and cannot produce on their own. Although Buchnera aphidicola is the most abundant bacteria inside the sugarcane aphid, it is not the only one. When invasive insects arrive to a new location, field or crop, they bring their team of microbial symbionts with them.

That means even same species insects can have distinct differences in their microbiota. Knowing these differences by identifying the genetic variants in sugarcane aphids and their symbionts holds the promise of producers one day being able to target pesticides more precisely — not just the type of insects in their fields but the genetic makeup of those pests and their symbionts.

“A great example of the role microbes can play in insects is that certain types of bacteria actually enable some aphids to survive attacks by their natural enemies more readily than others,” Holt said.

Passion becomes profession

Holt has early childhood memories of being fascinated by insects but did not realize early on that her passion could become her profession. She recalls as a child collecting insects from plants and putting them in jars to observe; something she continues to do to this day.

Holt earned a bachelor’s degree in biology from Cal Poly Pomona, with a minor in botany. While a student, she worked as a research assistant in the Entomology Department at the University of California Riverside. Holt went on to earn her master’s in biology at California State University Northridge. Soon after, she got a fulltime teaching job in Houston at San Jacinto College North.

“I haven’t had a traditional career path or been a traditional student in any way,” Holt said. “Deciding to go back to graduate school for entomology after working for five years was a thing I had to decide I was going to do, I could do, and then I had to make it happen.”

Friends and family pointed out that leaving a good fulltime teaching job to pursue a doctorate, especially in a different field of study, was a risky decision. But as much as Holt enjoyed teaching biology at the college level, she kept being drawn back to insects.

“I knew I had to have a doctorate in entomology if I was ever going to be able to fully pursue my passion professionally,” Holt explained. “I want to help make entomology more accessible to a broader range of students.”

Holt understands most people are raised and conditioned to think all insects are scary or creepy, a bias that can be hard to overcome. She hopes she can inspire the next generation of students to think insects are cool and to dispel fear and misinformation.

“I think if we show students enough amazing insect photos and explain how the benefits of many insects outweigh the negatives, we could help dispel a lot of fear and falsehoods. Teaching the connection insects have to our ecosystem and agriculture, and why the portrayal of wasps, hornets, spiders and the like are usually inaccurate, would go a long way.”

Holt also said explaining more about the importance of pollinators and which insects are a pest versus which are beneficial could help by increasing the general public’s understanding of bugs.

Transition to Texas A&M

“It was one of the best decisions I ever made to come to Texas A&M, but it wasn’t easy,” she said. Holt is the first person in her family to pursue a doctorate, so she felt like the path to achieve that wasn’t something obvious or that she had seen laid out before. But she knew her persistence and perseverance could lead her to that dream job in entomology.

Holt said Texas A&M kept coming up as the alma mater of many of her mentors. Once she was accepted into the doctoral program, she knew it was an opportunity she couldn’t pass up. She said going from being a teacher to being a student again gave her a unique perspective.

“It was scary and there are no guarantees with pursuing a Ph.D.; until you take prelims it feels really up in air if you’ll be deemed doctorate material,” she said. “But I treated my prelims like a job interview, which helped me deal with the stress.”

“Holt’s commitment to finding answers to her scientific questions is energizing,” Medina said. “When she asks a question, she learns whatever she needs to in order to answer that question, If she assesses that she may not be able to learn all she needs to within a reasonable time frame, she incorporates collaborators into her projects. She is great at networking, so there is enough expertise within her network to answer all sorts of scientific questions.”

“Sometimes in entomology, we come up with messy data,” Holt acknowledged. “But maybe that data is from plucking individual insects from different fields and subsequently genetically distinct populations all together. At first, we may think there is no pattern but maybe we can understand the messy data if we also include the individual’s genetic and microbial backgrounds. Maybe we can better control our control groups.”

Awards and accolades

In addition to her NIFA grant, Holt has received a Graduate Diversity Excellence Fellowship and a Lechner Excellence fellowship at Texas A&M. She has also been the recipient of the Entomological Society of America’s John Henry Comstock Award.

Holt is a founding member of Aggie Women in Entomology. She has participated in the Texas A&M University Women in Science and Engineering, TAMU WISE, and the LAUNCH Program, which stands for Learning Communities, Academic Excellence, Undergraduate Research, National Fellowships, Capstones  and Honors.

“I’m proud of my awards and scholarships, it is nice to be recognized for hard work,” Holt said. “Much of the time accomplishments don’t get recognized, so it is important to celebrate achievements. And when accomplishments are recognized, it is great having the satisfaction of knowing this is something viewed as worthwhile to do and beneficial. That helps keep me going when things are stressful or difficult.”

STEM, paying it forward

“There weren’t many people who looked like me — multiracial and female —  in my fields of study,” Holt explained. “I want people who don’t think they fit or belong in the STEM field to know that they can find the resources, strength and the resilience to do it.”

Holt said she feels lucky to have had so many strong and gifted mentors over the course of her academic career. It is extraordinarily important to her that she can also serve in that role for past, present and future students.

“No one does it singlehandedly; I am grateful for my mentors. It was up to me to make the decision to pursue my doctorate and put the steps in place to work toward achieving that goal but what the love and support of my partner, friends and family has meant to me can’t be underestimated.”

She also strives to shine a light on how different fields can work together to solve complex problems. Holt shares the example of the Human Microbiome Project as something that can shine a light for other fields and make microbiota better appreciated and understood.

Holt is also excited by the prospect of better understanding the function of microbes and how a group may function differently from individual to individual.

“In addition to what I can do to aid agriculture, at the end of my career I want to be able to say I made entomology more accessible,” Holt said. “My dad always said, ‘If you find something you like and then do that for a career, it won’t feel like work.’ I’d say entomology is a win for me.”

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